{"id":960,"date":"2020-08-16T14:47:51","date_gmt":"2020-08-16T06:47:51","guid":{"rendered":"https:\/\/www.yohz.com\/blogs\/?p=960"},"modified":"2020-08-16T14:50:27","modified_gmt":"2020-08-16T06:50:27","slug":"dicom-search-walk-through-preview","status":"publish","type":"post","link":"https:\/\/www.yohz.com\/blogs\/2020\/08\/16\/dicom-search-walk-through-preview\/","title":{"rendered":"DICOM Search walk-through (preview)"},"content":{"rendered":"<p>We&#8217;ll do a walk-through on how to index your DICOM files and how to retrieve and display the images you need.<\/p>\n<p>We start by first creating a library in DICOM Search, and selecting the <strong>Add\/update images from folders<\/strong> option.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-961\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_01.png\" alt=\"\" width=\"696\" height=\"598\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_01.png 696w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_01-300x258.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_01-624x536.png 624w\" sizes=\"(max-width: 696px) 100vw, 696px\" \/><\/p>\n<p>We then enter the file search pattern which will be used to locate our DICOM files.\u00a0 Here, we&#8217;ll create thumbnails of our files, and enter the database file name to store the tag values and thumbnails in.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-963\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_03.png\" alt=\"\" width=\"696\" height=\"598\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_03.png 696w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_03-300x258.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_03-624x536.png 624w\" sizes=\"(max-width: 696px) 100vw, 696px\" \/><\/p>\n<p>DICOM Search will then start processing the files and report the status as it goes along.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-964\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_04.png\" alt=\"\" width=\"696\" height=\"598\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_04.png 696w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_04-300x258.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_04-624x536.png 624w\" sizes=\"(max-width: 696px) 100vw, 696px\" \/><\/p>\n<p>Once done, we can now run queries on the database.\u00a0 In this example, we want to retrieve all <strong>MRI<\/strong> images where the study description contains the word <strong>head<\/strong> or <strong>torso<\/strong>.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-965\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_05.png\" alt=\"\" width=\"853\" height=\"228\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_05.png 853w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_05-300x80.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_05-768x205.png 768w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_05-624x167.png 624w\" sizes=\"(max-width: 853px) 100vw, 853px\" \/><\/p>\n<p>At this point, you must be wondering how are we to remember the group and element values for each of the tags we want to search on.\u00a0 You don&#8217;t have to remember those values.\u00a0 Pressing <strong>F2<\/strong> will bring up a tags window where you can search for any tag values by description.<\/p>\n<p>E.g. if we search for <strong>modal<\/strong>, we can see all the tag values for modality.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-966\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_06.png\" alt=\"\" width=\"849\" height=\"528\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_06.png 849w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_06-300x187.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_06-768x478.png 768w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_06-624x388.png 624w\" sizes=\"(max-width: 849px) 100vw, 849px\" \/><\/p>\n<p>Likewise, if we search for <strong>study<\/strong>, we can see the tags containing the word <strong>study<\/strong>.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-967\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_07.png\" alt=\"\" width=\"849\" height=\"529\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_07.png 849w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_07-300x187.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_07-768x479.png 768w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_07-624x389.png 624w\" sizes=\"(max-width: 849px) 100vw, 849px\" \/><\/p>\n<p>When we run our query, all images matching our search criteria are returned.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-968\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_08.png\" alt=\"\" width=\"853\" height=\"690\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_08.png 853w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_08-300x243.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_08-768x621.png 768w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_08-624x505.png 624w\" sizes=\"(max-width: 853px) 100vw, 853px\" \/><\/p>\n<p>Depending on our query, we may choose to return only the tag values we are interested in seeing, or in our example. all of the tag values because we entered<\/p>\n<p><strong>SELECT * &#8230;<\/strong><\/p>\n<p>DICOM Search offers an alternative view to display the images returned by your query.\u00a0 This is the DICOM results viewer.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-970\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_09.png\" alt=\"\" width=\"1214\" height=\"690\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_09.png 1214w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_09-300x171.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_09-1024x582.png 1024w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_09-768x437.png 768w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_09-624x355.png 624w\" sizes=\"(max-width: 1214px) 100vw, 1214px\" \/><\/p>\n<p>On the left, the query results are grouped by patient, study, series, and and related images.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-971\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_10.png\" alt=\"\" width=\"377\" height=\"594\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_10.png 377w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_10-190x300.png 190w\" sizes=\"(max-width: 377px) 100vw, 377px\" \/><\/p>\n<p>You can display any of the image file in the main area simply by selecting it here.\u00a0 DICOM Search will display the frames of the images at the top, and the selected frame in the main area.\u00a0 You can play the sequence of images, display a single frame, view the transition from one frame to another and more in this area.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-972\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_11.png\" alt=\"\" width=\"762\" height=\"574\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_11.png 762w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_11-300x226.png 300w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_11-624x470.png 624w\" sizes=\"(max-width: 762px) 100vw, 762px\" \/><\/p>\n<p>On the right, the values of the DiCOM tags are listed.\u00a0 There is a patient specific tab that displays the patient data together with some image context tags<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-973\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_12.png\" alt=\"\" width=\"467\" height=\"574\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_12.png 467w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_12-244x300.png 244w\" sizes=\"(max-width: 467px) 100vw, 467px\" \/><\/p>\n<p>and a <strong>Tags <\/strong>tab that displays all the tag values found in the image.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-974\" src=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_13.png\" alt=\"\" width=\"460\" height=\"572\" srcset=\"https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_13.png 460w, https:\/\/www.yohz.com\/blogs\/wp-content\/uploads\/2020\/08\/dicomwt_13-241x300.png 241w\" sizes=\"(max-width: 460px) 100vw, 460px\" \/><\/p>\n<p>If you have any suggestions on how we can improve on this new view, please do drop us a line at <a href=\"mailto:support@yohz.com\">support@yohz.com<\/a>.\u00a0 Thank you.<\/p>\n<p>See also:<\/p>\n<ul>\n<li><a href=\"https:\/\/www.yohz.com\/blogs\/2020\/07\/22\/dicom-search-libraries-preview-1\/\">creating the DICOM Search database<\/a><\/li>\n<li><a href=\"https:\/\/www.yohz.com\/blogs\/2020\/07\/22\/dicom-search-querying-the-database-preview-2\/\">querying the DICOM Search database<\/a><\/li>\n<\/ul>\n<div class=\"fcbkbttn_buttons_block\" id=\"fcbkbttn_left\"><div class=\"fcbkbttn_like \"><fb:like href=\"https:\/\/www.yohz.com\/blogs\/2020\/08\/16\/dicom-search-walk-through-preview\/\" action=\"like\" colorscheme=\"light\" layout=\"button\"  size=\"small\"><\/fb:like><\/div><div class=\"fb-share-button  \" data-href=\"https:\/\/www.yohz.com\/blogs\/2020\/08\/16\/dicom-search-walk-through-preview\/\" data-type=\"button\" data-size=\"small\"><\/div><\/div>","protected":false},"excerpt":{"rendered":"<p>We&#8217;ll do a walk-through on how to index your DICOM files and how to retrieve and display the images you need. We start by first creating a library in DICOM Search, and selecting the Add\/update images from folders option. We then enter the file search pattern which will be used to locate our DICOM files.\u00a0 [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"categories":[126],"tags":[129],"_links":{"self":[{"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/posts\/960"}],"collection":[{"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/comments?post=960"}],"version-history":[{"count":3,"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/posts\/960\/revisions"}],"predecessor-version":[{"id":979,"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/posts\/960\/revisions\/979"}],"wp:attachment":[{"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/media?parent=960"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/categories?post=960"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.yohz.com\/blogs\/wp-json\/wp\/v2\/tags?post=960"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}